Faculty Members

LANGUAGE ≫ Japanese

Associate Professor
HOSSAIN MD SHAKHAWAT

Doctor of Engineering, Tokyo Institute of Technology, Japan, Japan, 2020

Masters in Engineering, Tokyo Institute of Technology, Japan, Japan, 2017

Masters of Science , Rajshahi University, Bangladesh, Bangladesh, 2013

Bachelor of Science, Rajshahi University, Bangladesh, Bangladesh, 2010

Post Doctorate, Memorial Sloan Kettering Cancer Center, USA, USA, 2021

Year of birth: 1987
Gender: Male
Affiliation:

- School of Informatics
- Graduate School of Enginering
Personal web site: https://hossain-aimlab.info
researchmap： https://researchmap.jp/hossain

Areas of specialization	Medical Image Analysis, Artificial Intelligence, Digital Pathology, Whole Slide Imaging, Cancer Diagnosis
Laboratory/research office	Medical Imaging and AI (AIM) Lab The AIM Lab is dedicated to advancing AI solutions in medical imaging. Our research lies at the intersection of computer vision, AI and healthcare, aiming to improve diagnostic accuracy, clinical decisions and patient outcomes. We value interdisciplinary thinking and offer a supportive environment for hands-on learning, innovation and real-world impact. Students will have opportunities to contribute to cutting-edge research, co-author publications, and collaborate with clinicians and international researchers. Interested students are encouraged to reach out and join us in transforming healthcare through intelligent solutions.
Current research topics
Educational background	2020: Doctor, Tokyo Institute of Technology, Japan, Japan
Professional background
Licenses
Academic societies	IEEE Society

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Courses

* Courses provided in English are shown with (E) mark

Undergraduate school
Graduate school

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Research activities

Research papers	Authors: HOSSAIN MD SHAKHAWAT, Munim Ahmed, Md Sahilur Rahman Title: From survey to solution: A deep learning framework for reliable monkeypox diagnosis using skin images Journal: Array, Vol. 28, Elsevier Year: 2025 Authors: Galib Muhammad Shahriar Himel, Munim Ahmed, Shamsun Nahar Shatabdy, Md Sahilur Rahman, HOSSAIN MD SHAKHAWAT, MM Mahbubul Syeed, Mohammad Faisal Uddin Title: Comparison of CNN and Transformer Models for Predicting the Effects of Anti-VEGF Drugs on Ovarian Cancer from Histopathology Images Journal: 2nd International Conference on Next-Generation Computing, IoT and Machine Learning (NCIM) 2025, IEEE Year: 2025 Authors: HOSSAIN MD SHAKHAWAT, Ashifur Rahman, Munim Ahmed, Kaniz Fatema, MM Mahbubul Syeed, Mohammad Anowar Hussen, Mohammad Faisal Uddin Title: Vision Transformer for the Categorization of Breast Cancer from H&E Histopathology Images Journal: Journal of Image and Graphics, Vol. 13, No. 4, EJournal Year: 2025 Authors: HOSSAIN MD SHAKHAWAT, Md Sahilur Rahman, Munim Ahmed, Anowar Hussen, Zahid Ullah, Mona Jamjoom Title: Automated Gleason Grading of Prostate Cancer from Low-Resolution Histopathology Images Using an Ensemble Network of CNN and Transformer Models Journal: Computers, Materials & Continua, Vol. 84, No. 2, Tech Science Press Year: 2025 Authors: Sharmin Islam Shroddha, Sanjana Raquib Bijoya, Towsif Ahmed, Umme Rumman Chaity, HOSSAIN MD SHAKHAWAT, MM Mahbubul Syeed, Mohammad Faisal Uddin Title: SmartFarming: Lumpy Skin Disease Detection from Smartphone-captured Cattle Images using Transformer Model Journal: 27th International Conference on Computer and Information Technology (ICCIT) 2024, pp. 1040-1045, IEEE Year: 2025 Authors: Md Sahilur Rahman, Munim Ahmed, HOSSAIN MD SHAKHAWAT, MM Mahbubul Syeed, Mohammad Faisal Uddin Title: Ensemble of Deep Learning Models to Select Ovarian Cancer Patients for Bevacizumab Monoclonal Therapy Journal: 27th International Conference on Computer and Information Technology (ICCIT) 2024, pp. 1968-1973, IEEE Year: 2025 Authors: Abdullah Al Shafi, Munim Ahmed, Md Sahilur Rahman, HOSSAIN MD SHAKHAWAT, Mohammad Faisal Uddin Title: Deep Learning for Imbalanced Gastrointestinal Image Classification: A Comparative Study of Architectural Choices Journal: Proceedings of the 3rd International Conference on Computing Advancements, pp. 741-746, ACM Year: 2025 Authors: Md Wahidur Rahman, Md Tarequl Islam, Md Rahat Khan, Mohammad Motiur Rahman, Munim Ahmed, Md Shahilur Rahman, HOSSAIN MD SHAKHAWAT Title: BDFreshFish: A Comprehensive Image Dataset of Bangladeshi Freshwater Fishes to Develop AI-driven Solutions for Autonomous Fisheries Management Journal: Proceedings of the 3rd International Conference on Computing Advancements, pp. 816-821, ACM Year: 2025 Authors: Munim Ahmed, Md Sahilur Rahman, HOSSAIN MD SHAKHAWAT, Md Mahmudur Rahman, Fariha Karim, Mahreen Tabassum Title: AI-assisted polyps detection to facilitate autonomous endoscopy examination Journal: Proceedings of the 3rd International Conference on Computing Advancements, pp. 896-901, ACM Year: 2025 Authors: Elman Alam, Md Tarequl Islam, Ishrat Zahan Raka, Onamika Sarkar Ritu, HOSSAIN MD SHAKHAWAT, Wahidur Rahman, Rahat Khan Title: Ripen Banana Dataset: A Comprehensive Resource for Carbide Detection and Ripening Stage Analysis to Enhance Food Quality and Agricultural Efficiency Journal: Data in Brief, Vol. 60, Elsevier Year: 2025 Authors: Ashifur Rahman, MM Mahbubul Syeed, Kaniz Fatema, Md. Rajaul Karim, Razib Hayat Khan, HOSSAIN MD SHAKHAWAT, Mohammad Faisal Uddin Title: An enhanced multi-head attention-based LSTM model for forecasting the surface water quality index Journal: Water Practice & Technology, Vol. 20, No. 4, IWA Publishing Year: 2025 Authors: Ashifur Rahman, MM Mahbubul Syeed, Kaniz Fatema, Razib Hayat Khan, HOSSAIN MD SHAKHAWAT, Mohammad Faisal Uddin Title: An Interpretable Hybrid CNN-SVM Model for Predicting Stress Among University Students Journal: 21st International Conference on Computer Systems and Applications (AICCSA), IEEE Year: 2025 Authors: Md Rajaul Karim, MM Mahbubul Syeed, Ashifur Rahman, Khondkar Ayaz Rabbani, Kaniz Fatema, Razib Hayat Khan, HOSSAIN MD SHAKHAWAT, Mohammad Faisal Uddin Title: A Comprehensive Dataset of Surface Water Quality Spanning 1940-2023 for Empirical and ML Adopted Research Journal: Scientific Data (Nature), Vol. 12, No. 1, p. 391, Nature Year: 2025 Authors: Md Rajaul Karim, MM Mahbubul Syeed, Kaniz Fatema, HOSSAIN MD SHAKHAWAT, Razib Hayat Khan, Mohammad Faisal Uddin Title: AnxPred: A Hybrid CNN-SVM Model with XAI to Predict Anxiety among University Students Journal: IEEE 17th International Scientific Conference on Informatics (Informatics) 2024, pp. 132-137, IEEE Year: 2025 Authors: HOSSAIN MD SHAKHAWAT, Munim Ahmed, Md Sahilur Rahman, MM Mahbubul Syeed, Mohammad Faisal Uddin Title: Predicting the effect of Bevacizumab therapy in ovarian cancer from H&E whole slide images using transformer model Journal: Intelligence-Based Medicine, Vol. 11, p. 100231, ELSEVIER Year: 2025 Authors: Md Abrar Istiak, Razib Hayat Khan, Jahid Hasan Rony, MM Mahbubul Syeed, M Ashrafuzzaman, Md Rajaul Karim, HOSSAIN MD SHAKHAWAT, Mohammad Faisal Uddin Title: AqUavplant Dataset: A High-Resolution Aquatic Plant Classification and Segmentation Image Dataset Using UAV Journal: Scientific Data (Nature), Vol. 11, No. 1, p. 1411, Nature Year: 2024 Authors: Jahid Hasan Rony, MM Mahbubul Syeed, Razib Hayat Khan, Kaniz Fatema, HOSSAIN MD SHAKHAWAT, Mohammad Faisal Uddin Title: Predicting Depression Among University Students: a Comparative Assessment of ML & DL models using XAI Journal: 23rd International Symposium on Communications and Information Technologies (ISCIT), IEEE Year: 2024 Authors: Samiul Hoque, Imtiaz Ahmmed, Asif Jobair, HOSSAIN MD SHAKHAWAT, Mohammad Rejwan Uddin, Mahady Hasan Title: Development of a Scalable Industrial Process Monitoring Sensor System for Large-Scale IoT Networks using MQTT and Time Series Database Journal: 3rd International Conference on Electrical Power and Energy Systems (ICEPES), IEEE Year: 2024 Authors: Mohammad Rejwan Uddin, Mohsina Tabassum, Md Shad Ashfaque Hossain, HOSSAIN MD SHAKHAWAT, Mahady Hasan Title: Environmental Monitoring System for Renewable Energy Installations Journal: 3rd International Conference on Electrical Power and Energy Systems (ICEPES), IEEE Year: 2024 Authors: Md Jarif Hossain Khan, Jannat Un Nayeem Iqra, Md Ahnaf Rashid, Noman E Jawad, HOSSAIN MD SHAKHAWAT, Mohammad Rejwan Uddin, Mahady Hasan Title: IoT-Based Solar Automated Irrigation System Journal: 3rd International Conference on Electrical Power and Energy Systems (ICEPES), IEEE Year: 2024 Authors: Muzahidul Islam, Nohori Jobaida, HOSSAIN MD SHAKHAWAT, Mohammad Rejwan Uddin, Mahady Hasan Title: IoT-Based Smart Energy Monitoring and Energy Demand Response System Journal: 3rd International Conference on Electrical Power and Energy Systems (ICEPES), IEEE Year: 2024 Authors: Mohammad Rejwan Uddin, Wanas Uddin Ahmed, Mehadi Hassan Khan, HOSSAIN MD SHAKHAWAT, Mahady Hasan Title: Evaluation of the Design, Fabrication, and Operation of a Vertical Axis Wind Turbine (VAWT) Utilizing a Suggested Grid-Tie Topology Suitable for the Coastal Area of Bangladesh Journal: 3rd International Conference on Electrical Power and Energy Systems (ICEPES), IEEE Year: 2024 Authors: Fariza Rahman, Jihan Islam, Fabiha Rahman, HOSSAIN MD SHAKHAWAT, Mohammad Rejwan Uddin, Mahady Hasan Title: A Solar-Based Comprehensive Agriculture System Featuring Smart Irrigation, Weather Station, and Disease Detection Journal: 3rd International Conference on Electrical Power and Energy Systems (ICEPES), IEEE Year: 2024 Authors: Eshat Ahmad Shuvo, Wahidur Rahman, HOSSAIN MD SHAKHAWAT, Md Tarequl Islam, Md Sadiq Iqbal Title: Bio-inspired Heuristic Optimization-based Cascaded Network for Diabetic Retinopathy Screening Journal: 3rd International Conference on Advancement in Electrical and Electronic Engineering (ICAEEE), IEEE Year: 2024 Authors: HOSSAIN MD SHAKHAWAT, Md Sahilur Rahman, Munim Ahmed, Nazia Alfaz, Sirajum Munira Shifat, MM Mahbubul Syeed, Mohammad Anowar Hussen, Mohammad Faisal Uddin Title: Residual Tumor Cellularity Assessment of Breast Cancer after Neoadjuvant Therapy using Image Transformer Journal: IEEE Access, Vol. 12, No. 1, p. 86083, IEEE Year: 2024 Authors: Md. Sakir Hossain, Md. Imran Ahmed, Ridoy Rayhan Khan, Hasan Mirza Hasibul, HOSSAIN MD SHAKHAWAT Title: Machine Learning-Assisted Interference Management in the 6G UAV Networks with Soft Frequency Reuse Journal: Intelligent Communication Networks, CRC Press Year: 2024 Authors: HOSSAIN MD SHAKHAWAT, Munim Ahmed, Md Sahilur Rahman, Mahreen Tabassum, Fariha Karim, Md Aulad Hossain, Razib Hayat Khan, M. M. Mahbubul Syeed, Mohammad Faisal Uddin Title: AI-Guided Anatomical Landmark and Anomalies Detection for Autonomous Endoscopy Examination Journal: Journal of Computer Science, Vol. 20, No. 8, pp. 858-871, Science Publications Year: 2024 Authors: Md. Sakir Hossain, Nishat Tasnim Haque, Sadia Afrin, HOSSAIN MD SHAKHAWAT, Md. Faisal Mahmud Anik, Swagoto Paul, Md. Ileas Pramanik, Md. Masudur Rahman Title: Deployment of UAV-assisted 6G wireless networks using whale optimisation algorithm Journal: International Journal of Wireless and Mobile Computing, Vol. 26, No. 3, pp. 251-261, Inderscience Publishers (IEL) Year: 2024 Authors: Md Tarequl Islam, Wahidur Rahman, HOSSAIN MD SHAKHAWAT, Kaniz Roksana, Irma Dominguez Azpiroz, Raquel Martinez Diaz, Imran Ashraf, Md Abdus Samad Title: Medicinal plant classification using particle swarm optimized cascaded network Journal: IEEE Access, Vol. 12, p. 42465, IEEE Year: 2024 Authors: Md Mehedi Hasan, Nazia Alfaz, Md Al Maksud Alam, Ashiqur Rahman, HOSSAIN MD SHAKHAWAT, Shakila Rahman Title: Detection of Parkinson’s Disease from T2-Weighted Magnetic Resonance Imaging Scans Using EfficientNet-V2 Journal: 26th International Conference on Computer and Information Technology (ICCIT), IEEE Year: 2024 Authors: HOSSAIN MD SHAKHAWAT, Md Mahmudur Rahman, MM Mahbubul Syeed, Ummae Hamida Hannan, Mohammad Faisal Uddin, Sahria Bakar Mumu Title: CaViT: Early stage dental caries detection from smartphone-image using vision transformer Journal: 2023 4th International Conference on Artificial Intelligence, Robotics and Control (AIRC), IEEE Year: 2023 Authors: Razib Hayat Khan, Ankan Shahriar Islam, Md. Ahosan Hossain Sijan, MM Mahbubul Syeed, Mohammad Faisal Uddin, HOSSAIN MD SHAKHAWAT Title: Augmented Scope-Based E-Commerce Business Model for Emerging Markets Journal: Journal of Computer Science, Vol. 19, No. 12, pp. 1410-1422, Science Publications Year: 2023 Authors: Md Abrar Istiak, MM Mahbubul Syeed, HOSSAIN MD SHAKHAWAT, Mohammad Faisal Uddin, Mahady Hasan, Razib Hayat Khan, Nafis Saami Azad Title: Adoption of Unmanned Aerial Vehicle (UAV) imagery in agricultural management: A systematic literature review Journal: Ecological Informatics, Vol. 78, Elsevier Year: 2023 Authors: HOSSAIN MD SHAKHAWAT, Md Mahmudur Rahman, MM Mahbubul Syeed, Mohammad Faisal Uddin, Mahady Hasan, Md Aulad Hossain, Amel Ksibi, Mona M Jamjoom, Md Abdus Samad Title: DeepPoly: deep learning-based polyps segmentation and classification for autonomous colonoscopy examination Journal: IEEE Access, Vol. 11, pp. 95889-95902, IEEE Year: 2023 Authors: HOSSAIN MD SHAKHAWAT, Umme Sadia Salsabil, MM Mahbubul Syeed, Md Mahmudur Rahman, Kaniz Fatema, Mohammad Faisal Uddin Title: SmartPoultry: Early detection of poultry disease from smartphone captured fecal image Journal: 20th International Joint Conference on Computer Science and Software Engineering (JCSSE), IEEE Year: 2023 Authors: MM Mahbubul Syeed, Md Rajaul Karim, HOSSAIN MD SHAKHAWAT, Kaniz Fatema, Mohammad Faisal Uddin, Razib Hayat Khan Title: An IoT Intensive AI-integrated System for Optimized Surface Water Quality Profiling Journal: 20th International Joint Conference on Computer Science and Software Engineering (JCSSE), IEEE Year: 2023 Authors: HOSSAIN MD SHAKHAWAT, Galib Muhammad Shahriar, MM Mahbubul Syeed, Mohammad Faisal Uddin, Mahady Hasan, Shingla Shivam, Suresh Advani Title: Region of interest (ROI) selection using vision transformer for automatic analysis using whole slide images Journal: Scientific Reports (Nature), Vol. 13, No. 1, Springer Year: 2023 Authors: MM Mahbubul Syeed, HOSSAIN MD SHAKHAWAT, Md Rajaul Karim, Mohammad Faisal Uddin, Mahady Hasan, Razib Hayat Khan Title: Surface water quality profiling using the water quality index, pollution index and statistical methods: A critical review Journal: Environmental and Sustainability Indicators, Vol. 18, Elsevier Year: 2023 Authors: HOSSAIN MD SHAKHAWAT, Matthew Hanna, Kareem Ibrahim, Rene Serrette, Peter Ntiamoah, Marcia Edelweiss, Edi Brogi, Meera Hameed, Masahiro Yamaguchi, Dara Ross, Yukako Yagi Title: Automatic Grading of Invasive Breast Cancer Patients for the Decision of Therapeutic Plan Journal: Artificial Intelligence for Disease Diagnosis and Prognosis in Smart Healthcare, pp. 123-146, CRC Press Year: 2023 Authors: HOSSAIN MD SHAKHAWAT, Md Sakir Hossain, Alamgir Kabir, SM Hasan Mahmud, MM Manjurul Islam, Faisal Tariq Title: Review of artifact detection methods for automated analysis and diagnosis in digital pathology Journal: Artificial Intelligence for Disease Diagnosis and Prognosis in Smart Healthcare, pp. 177-202, CRC Press Year: 2023 Authors: Jakaria Islam Emon, MM Manjurul Islam, Syeda Amina Abedin, HOSSAIN MD SHAKHAWAT, Rupam Kumar Das Title: Real-Time Facemask Detection Using Deep Convolutional Neural Network-Based Transfer Learning Journal: Artificial Intelligence for Disease Diagnosis and Prognosis in Smart Healthcare, pp. 243-254, CRC Press Year: 2023 Authors: Shaharia Sifat, Md Sakir Hossain, Sadia Afrin Tonny, Bejoy Majumder, Riftana Mahajabin, HOSSAIN MD SHAKHAWAT Title: Android Ransomware Attacks Detection with Optimized Ensemble Learning Journal: International Conference on Cybersecurity, Cybercrimes, and Smart Emerging Technologies, Vol. 4, pp. 41-53, Springer International Publishing Year: 2023 Authors: HOSSAIN MD SHAKHAWAT, Galib Muhammad Shahriar, MM Mahbubul Syeed, Mohammad Faisal Uddin, Mahady Hasan, Md Sakir Hossain, Rubina Bari Title: Tissue artifact segmentation and severity assessment for automatic analysis using WSI Journal: IEEE Access, Vol. 11, pp. 21977-21991, IEEE Year: 2023 Authors: Md Sakir Hossain, Naim Hasan, Md Abdus Samad, HOSSAIN MD SHAKHAWAT, Joydeep Karmoker, Foysol Ahmed, KFM Nafiz Fuad, Kwonhue Choi Title: Android ransomware detection from traffic analysis using metaheuristic feature selection Journal: IEEE Access, Vol. 10, pp. 128754-128763, IEEE Year: 2022 Authors: HOSSAIN MD SHAKHAWAT, MM Mahbubul Syeed, Kaniz Fatema, Mohammad Faisal Uddin Title: The perception of health professionals in Bangladesh toward the digitalization of the health sector Journal: International Journal of Environmental Research and Public Health, Vol. 19, No. 20, MDPI Year: 2022 Authors: Kanis R Mim, Md Sakir Hossain, Sumona A Tisha, Kallul R Kalpo, Mehedi H Bakul, HOSSAIN MD SHAKHAWAT Title: Traffic Analysis-Based Android SMS Malware Detection Using Machine Learning Journal: Proceedings of International Conference on Fourth Industrial Revolution and Beyond 2021, Vol. 437, pp. 305-317, Springer Nature Singapore Year: 2022 Authors: HOSSAIN MD SHAKHAWAT, MM Mahbubul Syeed, Kaniz Fatema, Md Sakir Hossain, Mohammad Faisal Uddin Title: Singular Nuclei Segmentation for Automatic HER2 Quantification Using CISH Whole Slide Images Journal: Sensors, Vol. 22, No. 19, MDPI Year: 2022 Authors: HOSSAIN MD SHAKHAWAT, Md Ezaz Raihan, Md Sakir Hossain, MM Mahbubul Syeed, Harunur Rashid, Md Shaheed Reza Title: Aedes Larva Detection Using Ensemble Learning to Prevent Dengue Endemic Journal: BioMedInformatics, Vol. 2, No. 3 Year: 2022 Authors: HOSSAIN MD SHAKHAWAT, Tomoya Nakamura, Fumikazu Kimura, Yukako Yagi, Masahiro Yamaguch Title: Automatic quality evaluation of whole slide images for the practical use of whole slide imaging scanner Journal: ITE Transactions On Media Technology And Applications, Vol. 8, No. 4, pp. 252-268, The Institute of Image Information and Television Engineers Year: 2020 Authors: HOSSAIN MD SHAKHAWAT, Matthew G Hanna, Naohiro Uraoka, Tomoya Nakamura, Marcia Edelweiss, Edi Brogi, Meera R Hameed, Masahiro Yamaguchi, Dara S Ross, Yukako Yagi Title: Automatic quantification of HER2 gene amplification in invasive breast cancer from chromogenic in situ hybridization whole slide images Journal: Journal of Medical Imaging, Vol. 6, No. 4, Society of Photo-Optical Instrumentation Engineers Year: 2019 Authors: HOSSAIN MD SHAKHAWAT, Toyama Nakamura, Fumikazu Kimura, Yukako Yagi, Masahiro Yamaguchi Title: Practical image quality evaluation for whole slide imaging scanner Journal: Biomedical Imaging and Sensing Conference (SPIE), Vol. 10711, SPIE Year: 2018
Invited lectures	Seminar on Scientific Paper Writing , IEEE Computer Society IUB Student Branch Chapter. , Dhaka, Bangladesh, 2024 Effective Verbal and Non-verbal Communication in Academic Presentations, IUB Arrows and Dept of CSE, Independent University, Bangladesh, Dhaka, Bangladesh, 2024 Artificial Intelligence: What, Why and How?, Think Loud: RIoT Research Hour, Independent University, Bangladesh, Dhaka, Bangladesh, 2024 HER2 Grading of Breast Cancer using WSI: From Molecule to Morphology , Next Generation Digital Pathology Conference, 2023, Boston, USA, Boston, USA, 2023 Decision Support System for Invasive Breast Cancer Patients: A step towards digital pathology, Distinguished Lecture Series, American International University- Bangladesh, Dhaka, Bangladesh, 2021 Whole Slide Imaging- key to Digital Pathology , Department of CSE, Rajshahi University , Rajshahi, Bangladesh, 2018
Awards	Best Paper Presentation Award, IEEE ICCIT, 2024 Pathology Informatics Award, Association of Pathology Informatics, USA, 2019

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